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Дата внесения публикации в базу 05-07-2024 11:03 не попадает в период стимулирования 01-06-2025 – 31-05-2026
Количество соавторов публикации - 4
Публикация в изданиях из Белого списка уровень: 1, K=20
  • Водясова Е. А.: количество аффилиаций - 2, вклад в КБПР публикации:
    формула: K/(Nсоавторов*Nаффил) = 20/(4*2) = 2.5
Статья в периодическом издании

Genome-Wide Identification, Characterisation, and Evolution of the Transcription Factor WRKY in Grapevine (Vitis vinifera): New View and Update

WoS 4.900/Q2 SCOPUS 1.179/Q1 БС 1
DOI https://doi.org/10.3390/ijms25116241
Язык Английский
Журнал International Journal of Molecular Sciences

ISSN: 1661-6596; Онлайн ISSN: 1422-0067
Год 2024
Выходные данные том: 25; выпуск: 11; статья: 6241; страниц (электронный ресурс): 28
Авторы
  1. Водясова E. A. (Vodiasova E.)
    Доп. аффилиация: Federal State Funded Institution of Science “The Labor Red Banner Order Nikita Botanical Gardens—National Scientific Center of the RAS”, Nikita, 298648 Yalta, Russia (ru)
  2. Sinchenko A.
    Federal State Funded Institution of Science “The Labor Red Banner Order Nikita Botanical Gardens—National Scientific Center of the RAS”, Nikita, 298648 Yalta, Russia (ru)
  3. Khvatkov P.
    Federal State Funded Institution of Science “The Labor Red Banner Order Nikita Botanical Gardens—National Scientific Center of the RAS”, Nikita, 298648 Yalta, Russia (ru)
  4. Dolgov S.
    Federal State Funded Institution of Science “The Labor Red Banner Order Nikita Botanical Gardens—National Scientific Center of the RAS”, Nikita, 298648 Yalta, Russia (ru)
    Branch of Shemyakin and Ovchinnikov Institute of Bioorganic Chemistry, 142290 Puschino, Russia (ru)
Даты Поступила в редакцию: 03.05.2024
После доработки: 29.05.2024
Принята к публикации: 03.06.2024
Опубликована: 05.06.2024
Абстракт WRKYs are a multigenic family of transcription factors that are plant-specific and involved in the regulation of plant development and various stress response processes. However, the evolution of WRKY genes is not fully understood. This family has also been incompletely studied in grapevine, and WRKY genes have been named with different numbers in different studies, leading to great confusion. In this work, 62 Vitis vinifera WRKY genes were identified based on six genomes of different cultivars. All WRKY genes were numbered according to their chromosomal location, and a complete revision of the numbering was performed. Amino acid variability between different cultivars was assessed for the first time and was greater than 5% for some WRKYs. According to the gene structure, all WRKYs could be divided into two groups: more exons/long length and fewer exons/short length. For the first time, some chimeric WRKY genes were found in grapevine, which may play a specific role in the regulation of different processes: VvWRKY17 (an N-terminal signal peptide region followed by a non-cytoplasmic domain) and VvWRKY61 (Frigida-like domain). Five phylogenetic clades A–E were revealed and correlated with the WRKY groups (I, II, III). The evolution of WRKY was studied, and we proposed a WRKY evolution model where there were two dynamic phases of complexity and simplification in the evolution of WRKY.
Ключевые слова: WRKY transcription factor, grape, Vitis vinifera, genome-wide analyses, phylogeny, grape cultivars
Сведения о финансировании, указанные в публикации The study is supported by the Russian Science Foundation Grant no. 23-76-10013.
URL https://www.mdpi.com/1422-0067/25/11/6241
Дополнительные сведения
IBSS 155

Запись создана: 05-07-2024 11:03
Последнее изменение: 02-12-2024 16:13

Страница журнала в E-library
Библиографическая ссылка:
Vodiasova E., Sinchenko A., Khvatkov P., Dolgov S. . Genome-Wide Identification, Characterisation, and Evolution of the Transcription Factor WRKY in Grapevine (Vitis vinifera): New View and Update // International Journal of Molecular Sciences. 2024. Vol. 25, iss. 11. Art. no. 6241 (28 p.). https://doi.org/10.3390/ijms25116241
[WoS 4.900/Q2][SCOPUS 1.179/Q1][БС 1]
Экспертное заключение: № 435, 2024
Белый список
Уровень БС
1
Индексация на момент включения в базу:
Web of Science
Статус
Да
Импакт-фактор/Квартиль(год)
4.900/Q2 (2023)
Идентификатор
001247017900001
SCOPUS
Статус
Да
Импакт-фактор/Квартиль(год)
1.179/Q1 (2023)
Идентификатор
2-s2.0-85195842653
РИНЦ
Статус
Нет
ID
67955862
EDN
UWVWED